PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0002s0259.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 191aa    MW: 20423.9 Da    PI: 5.3159
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0002s0259.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-171262155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         ++++GVr ++ +gr++AeIrdp++   + r++lg+f++ae+Aa+a++ a+ +++g
  Kalax.0002s0259.1.p 12 TRIRGVRKRP-WGRFAAEIRDPVK---KVRVWLGNFDSAEDAARAYDVAAISFRG 62
                         579*******.**********644...5***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.39E-311272No hitNo description
PfamPF008475.5E-111262IPR001471AP2/ERF domain
PROSITE profilePS5103223.1431370IPR001471AP2/ERF domain
SMARTSM003806.4E-351376IPR001471AP2/ERF domain
PRINTSPR003671.2E-81425IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-211472IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.8E-291571IPR001471AP2/ERF domain
PRINTSPR003671.2E-83652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MVPVAASDKP ETRIRGVRKR PWGRFAAEIR DPVKKVRVWL GNFDSAEDAA RAYDVAAISF  60
RGSRAKTNFP SSIPSPPAHP FYESEGFVMQ PQRAASSGMS STVESFIGHR SSNPGLVTAR  120
RPASVPNAVR EEGDCRSDCD SSSTMIDYGD GAVDGDVSCS KVVLPFDLNM PPPADADLEG  180
YDLIATALCL *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-211575768ATERF1
3gcc_A3e-211575768ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304374.12e-41ethylene-responsive transcription factor 3
RefseqXP_012461139.13e-41PREDICTED: ethylene-responsive transcription factor 3 isoform X1
RefseqXP_012461143.12e-41PREDICTED: ethylene-responsive transcription factor 3 isoform X2
SwissprotQ9FE671e-28ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLA0A0V0HV082e-47A0A0V0HV08_SOLCH; Putative ethylene-responsive transcription factor 3-like
STRINGGLYMA18G10290.11e-39(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.12e-21ethylene response factor 8